BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025C07LP1|AL428355
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1053 1737 0.0
>3x_Contig1053
Length = 5102
Score = 1737 bits (875), Expect = 0.0
Identities = 880/883 (99%)
Strand = Plus / Minus
Query: 1 atataccatgtcgtcgtttcggtactttttttccttggatttcaacttctttcctttctg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2383 atataccatgtcgtcgtttcggtacattttttccttggatttcaacttctttcctttctg 2324
Query: 61 ataattgtaaaaaaataaaggattaaacattaaggtataataatgcataaaggaaaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2323 ataattgtaaaaaaataaaggattaaacattaaggtataataatgcataaaggaaaaatc 2264
Query: 121 cagtatattgcaagcacagatgctaggcgatctctcgttcaagctatttttgtgagccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2263 cagtatattgcaagcacagatgctaggcgatctctcgttcaagctatttttgtgagccgc 2204
Query: 181 ttatgaagatttccaaccatcatgcaatcagaggttgatgatttggaacggagatatgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2203 ttatgaagatttccaaccatcatgcaatcagaggttgatgatttggaacggagatatgtc 2144
Query: 241 tccgtgtataaagagcttctattgcaactggacaagctatttcttttgcaaaatggtagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2143 tccgtgtataaagagcttctattgcaactggacaagctatttcttttgcaaaatggtagt 2084
Query: 301 aacatggatagcgaattgaaagctaaatcaagactacgtgctttacatcaacttaatgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2083 aacatggatagcgaattgaaagctaaatcaagactacgtgctttacatcaacttaatgtg 2024
Query: 361 tccgaaactgcatcgtatctgaatatgaaagataccaacaatgataccaagaggcaagtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2023 tccgaaactgcatcgtatctgaatatgaaagataccaacaatgataccaagaggcaagtc 1964
Query: 421 acaacccttcttgagaataaatacgagagagatggagaactacgcgtcaacatagaaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1963 acaacccttcttgagaataaatacgagagagatggagaactacgcgtcaacatagaaaaa 1904
Query: 481 cactggacattaattgamaagtggttgagtcagactcatgaaacaataaaactgcgacaa 540
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1903 cactggacattaattgaaaagtggttgagtcagactcatgaaacaataaaactgcgacaa 1844
Query: 541 aaattagtggaactctctgcaaaattcccagaacctgctgaaaactcaccgccagaccct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1843 aaattagtggaactctctgcaaaattcccagaacctgctgaaaactcaccgccagaccct 1784
Query: 601 aagcttacacagacgcttgagatgttgcggtccatatacagtgttcttgtcattcaaggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1783 aagcttacacagacgcttgagatgttgcggtccatatacagtgttcttgtcattcaaggc 1724
Query: 661 ggatatcaggacgtggtctttgatcacgattaacaacaatcaaaaccttgatgtaatata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1723 ggatatcaggacgtggtctttgatcacgattaacaacaatcaaaaccttgatgtaatata 1664
Query: 721 ttgatttagtgagcctttctattggtatatagctgctattcccttaatacggtgattcaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1663 ttgatttagtgagcctttctattggtatatagctgctattcccttaatacggtgattcaa 1604
Query: 781 tcttgaaagctctttgtgtgtacgtaaaattaagtaaattccagtatatcgcgattataa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1603 tcttgaaagctctttgtgtgtacgtaaaattaagtaaattccagtatatcgcgattataa 1544
Query: 841 gadaaagaaaagtgaggcgatgagatgtcataaaattttcaga 883
|| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1543 gaaaaagaaaagtgaggcgatgagatgtcataaaattttcaga 1501
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7032
Number of Sequences: 1807
Number of extensions: 7032
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)